| Protein ZmMYB10 | |
|---|---|
|
ZmMYB10 is a protein in the MYB family.
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|
| Information | |
| TF Name: | ZmMYB10 |
| Species: | Maize |
| TF Family: | MYB |
| Gene Name(Synonym): | MYB10 |
| Uniprot ID: | K7V4P0 |
| Subgenome: | 2 |
Protein ZmMYB10
ZmMYB10 is a protein in the MYB family.
| Overview of domains present in v5 transcripts | ||
|---|---|---|
| PF00249 | PF13921 | |
| Zm00001eb360850_T001 |  | |
Protein-DNA Interactions
Meme Logos for Maize v4 Gene IDs
| Gene ID | Type | MEME Logo | Sequence | FIMO | Position |
|---|---|---|---|---|---|
| Zm00001d011645 | DAPseq |  |
sequence | fimo | position |
| Zm00001d011645 | DAPseq |  |
sequence | fimo | position |
| Zm00001d011645 | ChIPseq |  |
sequence | fimo | position |
| Zm00001d011645 | PChIPseq |  |
sequence | fimo | position |
Interactions where ZmMYB10 is the regulator
Interactions where ZmMYB10 is the target
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Zm00001eb360850_T001 from maize genome v5
Amino Acid Sequence
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MMRKPAVQQRGAGAIRTLKRGAWTPEEDELLARAVAKDGEGRWRTLPRRAGLLRCGKSCRLRWMNYLRPDIKRGPIAADE
EDLILRLHRLLGNRWSLIAGRLPGRTDNEVKNYWNSHLSKKLVARGIDPRTHTPLPAAAASLHSHSHRADDDSPAGAAGS
SADKTPPPLVEVEPSVAPPPAQPNSSFGDGSSGDFAGGMMGLGSEGFDGVGDPFCAPAPGGFHLGCPVVDDATFSSFLDS
LMNEERMRIADYIGDHRDADGGNDQGGAY
MMRKPAVQQRGAGAIRTLKRGAWTPEEDELLARAVAKDGEGRWRTLPRRAGLLRCGKSCRLRWMNYLRPDIKRGPIAADE
EDLILRLHRLLGNRWSLIAGRLPGRTDNEVKNYWNSHLSKKLVARGIDPRTHTPLPAAAASLHSHSHRADDDSPAGAAGS
SADKTPPPLVEVEPSVAPPPAQPNSSFGDGSSGDFAGGMMGLGSEGFDGVGDPFCAPAPGGFHLGCPVVDDATFSSFLDS
LMNEERMRIADYIGDHRDADGGNDQGGAY
MMRKPAVQQRGAGAIRTLKRGAWTPEEDELLARAVAKDGEGRWRTLPRRAGLLRCGKSCRLRWMNYLRPDIKRGPIAADE
EDLILRLHRLLGNRWSLIAGRLPGRTDNEVKNYWNSHLSKKLVARGIDPRTHTPLPAAAASLHSHSHRADDDSPAGAAGS
SADKTPPPLVEVEPSVAPPPAQPNSSFGDGSSGDFAGGMMGLGSEGFDGVGDPFCAPAPGGFHLGCPVVDDATFSSFLDS
LMNEERMRIADYIGDHRDADGGNDQGGAY
MMRKPAVQQRGAGAIRTLKRGAWTPEEDELLARAVAKDGEGRWRTLPRRAGLLRCGKSCRLRWMNYLRPDIKRGPIAADE
EDLILRLHRLLGNRWSLIAGRLPGRTDNEVKNYWNSHLSKKLVARGIDPRTHTPLPAAAASLHSHSHRADDDSPAGAAGS
SADKTPPPLVEVEPSVAPPPAQPNSSFGDGSSGDFAGGMMGLGSEGFDGVGDPFCAPAPGGFHLGCPVVDDATFSSFLDS
LMNEERMRIADYIGDHRDADGGNDQGGAY
MMRKPAVQQRGAGAIRTLKRGAWTPEEDELLARAVAKDGEGRWRTLPRRAGLLRCGKSCRLRWMNYLRPDIKRGPIAADE
EDLILRLHRLLGNRWSLIAGRLPGRTDNEVKNYWNSHLSKKLVARGIDPRTHTPLPAAAASLHSHSHRADDDSPAGAAGS
SADKTPPPLVEVEPSVAPPPAQPNSSFGDGSSGDFAGGMMGLGSEGFDGVGDPFCAPAPGGFHLGCPVVDDATFSSFLDS
LMNEERMRIADYIGDHRDADGGNDQGGAY
MMRKPAVQQRGAGAIRTLKRGAWTPEEDELLARAVAKDGEGRWRTLPRRAGLLRCGKSCRLRWMNYLRPDIKRGPIAADE
EDLILRLHRLLGNRWSLIAGRLPGRTDNEVKNYWNSHLSKKLVARGIDPRTHTPLPAAAASLHSHSHRADDDSPAGAAGS
SADKTPPPLVEVEPSVAPPPAQPNSSFGDGSSGDFAGGMMGLGSEGFDGVGDPFCAPAPGGFHLGCPVVDDATFSSFLDS
LMNEERMRIADYIGDHRDADGGNDQGGAY
MMRKPAVQQRGAGAIRTLKRGAWTPEEDELLARAVAKDGEGRWRTLPRRAGLLRCGKSCRLRWMNYLRPDIKRGPIAADE
EDLILRLHRLLGNRWSLIAGRLPGRTDNEVKNYWNSHLSKKLVARGIDPRTHTPLPAAAASLHSHSHRADDDSPAGAAGS
SADKTPPPLVEVEPSVAPPPAQPNSSFGDGSSGDFAGGMMGLGSEGFDGVGDPFCAPAPGGFHLGCPVVDDATFSSFLDS
LMNEERMRIADYIGDHRDADGGNDQGGAY
MMRKPAVQQRGAGAIRTLKRGAWTPEEDELLARAVAKDGEGRWRTLPRRAGLLRCGKSCRLRWMNYLRPDIKRGPIAADE
EDLILRLHRLLGNRWSLIAGRLPGRTDNEVKNYWNSHLSKKLVARGIDPRTHTPLPAAAASLHSHSHRADDDSPAGAAGS
SADKTPPPLVEVEPSVAPPPAQPNSSFGDGSSGDFAGGMMGLGSEGFDGVGDPFCAPAPGGFHLGCPVVDDATFSSFLDS
LMNEERMRIADYIGDHRDADGGNDQGGAY
| Secondary Structure Color Code | |
|---|---|
| BEND | region with high backbone curvature without specific hydrogen bonding |
| HELX_LH_PP_P | left-handed polyproline helix |
| HELX_RH_3T_P | right-handed 3-10 helix |
| HELX_RH_AL_P | right-handed alpha helix |
| HELX_RH_PI_P | right-handed pi helix |
| STRN | beta strand |
| TURN_TY1_P | type I turn |
| UNDETERMINED | no data available |
| Domains Present | |
|---|---|
| PF00249 |
|
| PF13921 |
|
| PF00249 |
|
| PF13921 |
|
| Hover here to show all domains | |
Nucleotide Sequence
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ATGATGATGCGGAAGCCGGCGGTGC...
ATGATGATGCGGAAGCCGGCGGTGCAGCAGCGTGGCGCGGGGGCGATAAGGACGCTCAAGCGGGGTGCGTGGACGCCGGAGGAGGACGAGCTGCTGGCGCGGGCCGTGGCGAAGGACGGGGAGGGGCGGTGGCGCACGCTGCCGCGGCGGGCGGGGCTGCTTCGCTGCGGCAAGAGCTGCAGGCTCCGCTGGATGAACTACCTCAGGCCGGACATCAAGCGCGGGCCTATCGCCGCCGACGAGGAGGACCTCATCCTCCGCCTCCACCGCCTGCTCGGAAACCGGTGGTCGCTGATCGCTGGGCGTCTGCCTGGCCGCACGGACAACGAGGTCAAGAACTACTGGAACTCGCACCTCAGCAAGAAGCTCGTCGCGCGGGGCATCGACCCGCGCACGCACACGCCTCTGCCCGCAGCAGCTGCGAGCCTGCACTCGCACTCCCACCGCGCCGACGACGACTCACCAGCAGGAGCCGCCGGTTCGTCTGCCGACAAGACGCCGCCGCCACTGGTGGAAGTCGAGCCATCGGTTGCGCCGCCGCCAGCGCAGCCGAACTCATCTTTCGGCGACGGAAGCAGCGGCGACTTCGCGGGGGGCATGATGGGTCTAGGCTCCGAGGGCTTCGATGGAGTCGGTGATCCGTTCTGTGCACCAGCTCCTGGCGGCTTCCACTTGGGCTGCCCCGTCGTGGACGACGCCACCTTCTCCTCGTTCCTCGACTCGCTGATGAACGAGGAGCGCATGCGCATCGCCGATTACATTGGAGATCACAGGGATGCTGATGGTGGGAACGACCAGGGTGGAGCTTATTAG
GRMZM2G395672_T01 from maize genome v3
Amino Acid Sequence
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MRKPAVQQRGAGAIRTLKRGAWTPEEDELLARAVAKDGEGRWRTLPRRAGLLRCGKSCRLRWMNYLRPDIKRGPIAADEE
DLILRLHRLLGNRWSLIAGRLPGRTDNEVKNYWNSHLSKKLVARGIDPRTHTPLPAAAASLHSHSHRADDDSPAGAAGSS
ADKTPPPLVEVEPSVAPPPAQPNSSFGDGSSGDFAGGMMGLGSEGFDGVGDPFCAPAPGGFHLGCPVVDDATFSSFLDSL
MNEERMRIADYIGDHRDADGGNDQGGAY
Nucleotide Sequence
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ATGCGGAAGCCGGCGGTGCAGCAGC...
ATGCGGAAGCCGGCGGTGCAGCAGCGTGGCGCGGGGGCGATAAGGACGCTCAAGCGGGGTGCGTGGACGCCGGAGGAGGACGAGCTGCTGGCGCGGGCCGTGGCGAAGGACGGGGAGGGGCGGTGGCGCACGCTGCCGCGGCGGGCGGGGCTGCTTCGCTGCGGCAAGAGCTGCAGGCTCCGCTGGATGAACTACCTCAGGCCGGACATCAAGCGCGGGCCTATCGCCGCCGACGAGGAGGACCTCATCCTCCGCCTCCACCGCCTGCTCGGAAACCGGTGGTCGCTGATCGCTGGGCGTCTGCCTGGCCGCACGGACAACGAGGTCAAGAACTACTGGAACTCGCACCTCAGCAAGAAGCTCGTCGCGCGGGGCATCGACCCGCGCACGCACACGCCTCTGCCCGCAGCAGCTGCGAGCCTGCACTCGCACTCCCACCGCGCCGACGACGACTCACCAGCAGGAGCCGCCGGTTCGTCTGCCGACAAGACGCCGCCGCCACTGGTGGAAGTCGAGCCATCGGTTGCGCCGCCGCCAGCGCAGCCGAACTCATCTTTCGGCGACGGAAGCAGCGGCGACTTCGCGGGGGGCATGATGGGTCTAGGCTCCGAGGGCTTCGATGGAGTCGGTGATCCGTTCTGTGCACCAGCTCCTGGCGGCTTCCACTTGGGCTGCCCCGTCGTGGACGACGCCACCTTCTCCTCGTTCCTCGACTCGCTGATGAACGAGGAGCGCATGCGCATCGCCGATTACATTGGAGATCACAGGGATGCTGATGGTGGGAACGACCAGGGTGGAGCTTATTAG
Zm00001d011645_T001 from maize genome v4
Amino Acid Sequence
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MRKPAVQQRGAGAIRTLKRGAWTPEEDELLARAVAKDGEGRWRTLPRRAGLLRCGKSCRLRWMNYLRPDIKRGPIAADEE
DLILRLHRLLGNRWSLIAGRLPGRTDNEVKNYWNSHLSKKLVARGIDPRTHTPLPAAAASLHSHSHRADDDSPAGAAGSS
ADKTPPPLVEVEPSVAPPPAQPNSSFGDGSSGDFAGGMMGLGSEGFDGVARDTEPTAIPVSASVVFFLPL
Nucleotide Sequence
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ATGCGGAAGCCGGCGGTGCAGCAGC...
ATGCGGAAGCCGGCGGTGCAGCAGCGTGGCGCGGGGGCGATAAGGACGCTCAAGCGGGGTGCGTGGACGCCGGAGGAGGACGAGCTGCTGGCGCGGGCCGTGGCGAAGGACGGGGAGGGGCGGTGGCGCACGCTGCCGCGGCGGGCGGGGCTGCTTCGCTGCGGCAAGAGCTGCAGGCTCCGCTGGATGAACTACCTCAGGCCGGACATCAAGCGCGGGCCTATCGCCGCCGACGAGGAGGACCTCATCCTCCGCCTCCACCGCCTGCTCGGAAACCGGTGGTCGCTGATCGCTGGGCGTCTGCCTGGCCGCACGGACAACGAGGTCAAGAACTACTGGAACTCGCACCTCAGCAAGAAGCTCGTCGCGCGGGGCATCGACCCGCGCACGCACACGCCTCTGCCCGCAGCAGCTGCGAGCCTGCACTCGCACTCCCACCGCGCCGACGACGACTCACCAGCAGGAGCCGCCGGTTCGTCTGCCGACAAGACGCCGCCGCCACTGGTGGAAGTCGAGCCATCGGTTGCGCCGCCGCCAGCGCAGCCGAACTCATCTTTCGGCGACGGAAGCAGCGGCGACTTCGCGGGGGGCATGATGGGTCTAGGCTCCGAGGGCTTCGATGGAGTCGCAAGAGATACAGAGCCAACAGCTATTCCAGTTTCAGCATCTGTGGTCTTTTTCCTCCCCTTGTGA
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